BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015F11SP1|AL426890
(936 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1367 1783 0.0
>3x_Contig1367
Length = 7312
Score = 1783 bits (899), Expect = 0.0
Identities = 912/916 (99%), Gaps = 2/916 (0%)
Strand = Plus / Plus
Query: 23 tggatcaaatagtgtacactttcaagactcaaggggagatgttgccagaaaatgtcaaac 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5162 tggatcaaatagtgtacactttcaagactcaaggggagatgttgccagaaaatgtcaaac 5221
Query: 83 agataatatcagaatacaacactgcgttggaggctgctaaacaaagggatagctcaaatc 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5222 agataatatcagaatacaacactgcgttggaggctgctaaacaaagggatagctcaaatc 5281
Query: 143 ggaaaaggttaagtctcatggagcctcttgaaatcgatgatggtaatatcaccggtaaca 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5282 ggaaaaggttaagtctcatggagcctcttgaaatcgatgatggtaatatcaccggtaaca 5341
Query: 203 gcagcgacgaggactcacacgcgatggtatctaacagcaataaaattggcatcagaaaca 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5342 gcagcgacgaggactcacacgcgatggtatctaacagcaataaaattggcatcagaaaca 5401
Query: 263 attccttgtcgtcctcgagccatttctaccaccataaccaccacaatccgcagcaacaac 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5402 attccttgtcgtcctcgagccatttctaccaccataaccaccacaatccgcagcaacaac 5461
Query: 323 gtattcacaacgatctacatcgtctcagctcatcaaatctgataaggaaacggaaattta 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5462 gtattcacaacgatctacatcgtctcagctcatcaaatctgataaggaaacggaaattta 5521
Query: 383 gcggtacttcttcacccacagatgatattaccaacaaaactttgaacaaaataaatgaaa 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5522 gcggtacttcttcacccacagatgatattaccaacaaaactttgaacaaaataaatgaaa 5581
Query: 443 acgttgagaagttaaccaagatgttggaaagtcacgacgcgctactcaaaaaagttgtta 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5582 acgttgagaagttaaccaagatgttggaaagtcacgacgcgctactcaaaaaagttgtta 5641
Query: 503 gatacttggatatccagcattcaaggaccgatgatacggagagtactcaaagtgaccaaa 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5642 gatacttggatatccagcattcaaggaccgatgatacggagagtactcaaagtgaccaaa 5701
Query: 563 atgatggttccaacaatgctgctgctgctgctgcggccgccgctgctgccgtctcggc-- 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5702 atgatggttccaacaatgctgctgctgctgctgcggccgccgctgctgccgtctcggcag 5761
Query: 621 gaagcaacgtcctaaacctaaacccttccctttcagtacctgacatcgaccccaaccatg 680
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5762 caagcaacgtcctaaacctaaacccttccctttcagtacctgacatcgaccccaaccatg 5821
Query: 681 atccaaatgtgtacagtaatggtcacgtgaaccagaggtaagacaaataacagaacaaga 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5822 atccaaatgtgtacagtaatggtcacgtgaaccagaggtaagacaaataacagaacaaga 5881
Query: 741 agtgggaaattacaataactgttgaattcggagttcatctacccacacccacacccccac 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5882 agtgggaaattacaataactgttgaattcggagttcatctacccacacccacacccccac 5941
Query: 801 cccacatccacctcatctcacaggctggataaacactcaatgaatacggagataatcttc 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5942 cccacatccacctcatctcacaggctggataaacactcaatgaatacggagataatcttc 6001
Query: 861 ttctcaaaactgaaaaaaaatcaaacaccgctcactgaccgtaacaacgggtactacttc 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6002 ttctcaaaactgaaaaaaaatcaaacaccgctcactgaccgtaacaacgggtactacttc 6061
Query: 921 twactaaatactgtat 936
| ||||||||||||||
Sbjct: 6062 taactaaatactgtat 6077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7672
Number of Sequences: 1807
Number of extensions: 7672
Number of successful extensions: 247
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)